Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
USP45Q70EL2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.69■□□□□ 0.26
USP45Q70EL2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
USP45Q70EL2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.68■□□□□ 0.26
USP45Q70EL2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.68■□□□□ 0.26
USP45Q70EL2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 HLA-A-202ENST00000376806 1854 ntBASIC16.68■□□□□ 0.26
USP45Q70EL2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 AC004967.1-201ENST00000453589 447 ntBASIC16.68■□□□□ 0.26
USP45Q70EL2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.68■□□□□ 0.26
USP45Q70EL2 KRT18P34-201ENST00000488218 1270 ntBASIC16.68■□□□□ 0.26
USP45Q70EL2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.68■□□□□ 0.26
USP45Q70EL2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.68■□□□□ 0.26
USP45Q70EL2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.68■□□□□ 0.26
USP45Q70EL2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
USP45Q70EL2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
USP45Q70EL2 AC016027.1-202ENST00000607927 1699 ntBASIC16.68■□□□□ 0.26
USP45Q70EL2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.68■□□□□ 0.26
USP45Q70EL2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP45Q70EL2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.67■□□□□ 0.26
USP45Q70EL2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
USP45Q70EL2 ADH5P3-201ENST00000433842 1137 ntBASIC16.67■□□□□ 0.26
USP45Q70EL2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.67■□□□□ 0.26
USP45Q70EL2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.67■□□□□ 0.26
USP45Q70EL2 AL135744.1-201ENST00000565098 629 ntBASIC16.67■□□□□ 0.26
USP45Q70EL2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.67■□□□□ 0.26
USP45Q70EL2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.67■□□□□ 0.26
USP45Q70EL2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.67■□□□□ 0.26
USP45Q70EL2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP45Q70EL2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
USP45Q70EL2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
USP45Q70EL2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
USP45Q70EL2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP45Q70EL2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.66■□□□□ 0.26
USP45Q70EL2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
USP45Q70EL2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms