Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AC092910.1-201ENST00000482027 1129 ntBASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 UNC93B6-202ENST00000528242 690 ntBASIC15.02■□□□□ -0
NHLRC1Q6VVB1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.02■□□□□ -0
NHLRC1Q6VVB1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 AC006538.1-201ENST00000567905 1585 ntBASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
NHLRC1Q6VVB1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 HLA-J-202ENST00000469281 1241 ntBASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 AL121894.2-201ENST00000602977 491 ntBASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 ACTL9-202ENST00000612068 1252 ntBASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.01□□□□□ -0.01
NHLRC1Q6VVB1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 MRPL20P1-201ENST00000400819 433 ntBASIC15□□□□□ -0.01
NHLRC1Q6VVB1 RNA5SP415-201ENST00000517246 115 ntBASIC15□□□□□ -0.01
NHLRC1Q6VVB1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NHLRC1Q6VVB1 AL353732.1-201ENST00000569618 1459 ntBASIC15□□□□□ -0.01
NHLRC1Q6VVB1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms