Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTR9Q6PD62 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CTR9Q6PD62 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 KRT8P23-201ENST00000560090 1207 ntBASIC19.74■□□□□ 0.75
CTR9Q6PD62 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTR9Q6PD62 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTR9Q6PD62 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 MIR346-201ENST00000362234 95 ntBASIC19.73■□□□□ 0.75
CTR9Q6PD62 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 IGHV3-62-201ENST00000520057 340 ntBASIC19.73■□□□□ 0.75
CTR9Q6PD62 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTR9Q6PD62 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTR9Q6PD62 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTR9Q6PD62 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CTR9Q6PD62 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms