Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC016027.1-202ENST00000607927 1699 ntBASIC15.76■□□□□ 0.11
LPCAT4Q643R3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LPCAT4Q643R3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 STK25P1-201ENST00000585406 838 ntBASIC15.75■□□□□ 0.11
LPCAT4Q643R3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.75■□□□□ 0.11
LPCAT4Q643R3 AC097637.2-201ENST00000624096 1997 ntBASIC15.75■□□□□ 0.11
LPCAT4Q643R3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 RPS2P55-201ENST00000397318 883 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AC007967.3-201ENST00000434308 558 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AL158047.1-201ENST00000445918 881 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AC107956.1-201ENST00000494359 873 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AC113410.3-201ENST00000623366 203 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AL671710.1-201ENST00000610245 2349 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 KRT8P10-201ENST00000450021 1447 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 AL109954.1-202ENST00000564051 2148 ntBASIC15.74■□□□□ 0.11
LPCAT4Q643R3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LPCAT4Q643R3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LPCAT4Q643R3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LPCAT4Q643R3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LPCAT4Q643R3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms