Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.26■□□□□ 0.19
SGO1Q5FBB7 AC006538.1-201ENST00000567905 1585 ntBASIC16.26■□□□□ 0.19
SGO1Q5FBB7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 RPS2P1-201ENST00000434010 821 ntBASIC16.25■□□□□ 0.19
SGO1Q5FBB7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 PAWRP1-201ENST00000451083 565 ntBASIC16.25■□□□□ 0.19
SGO1Q5FBB7 AC087163.2-201ENST00000457299 853 ntBASIC16.25■□□□□ 0.19
SGO1Q5FBB7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.25■□□□□ 0.19
SGO1Q5FBB7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SGO1Q5FBB7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 AC002310.6-201ENST00000624451 1377 ntBASIC16.24■□□□□ 0.19
SGO1Q5FBB7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SGO1Q5FBB7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SGO1Q5FBB7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms