Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ALOX12P2-203ENST00000570921 1945 ntBASIC14.98□□□□□ -0.01
CCDC58Q4VC31 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ACTG1P4-201ENST00000425123 1122 ntBASIC14.98□□□□□ -0.01
CCDC58Q4VC31 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 AC005363.2-201ENST00000618631 242 ntBASIC14.98□□□□□ -0.01
CCDC58Q4VC31 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 AL139011.1-202ENST00000642063 584 ntBASIC14.98□□□□□ -0.01
CCDC58Q4VC31 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC58Q4VC31 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 AL845331.1-201ENST00000424978 1190 ntBASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TSPY22P-201ENST00000427496 604 ntBASIC14.97□□□□□ -0.01
CCDC58Q4VC31 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 DUX4L17-201ENST00000557360 1267 ntBASIC14.97□□□□□ -0.01
CCDC58Q4VC31 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC58Q4VC31 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC58Q4VC31 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms