Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 AC068137.2-201ENST00000605408 478 ntBASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 AC074386.1-202ENST00000463561 864 ntBASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN20Q4JDL3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 AP002472.1-201ENST00000577490 586 ntBASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN20Q4JDL3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PTPN20Q4JDL3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms