Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 RNF216P1-203ENST00000404404 2427 ntBASIC19.09■□□□□ 0.65
USH1GQ495M9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
USH1GQ495M9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
USH1GQ495M9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USH1GQ495M9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
USH1GQ495M9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 SPDYE14P-201ENST00000442619 822 ntBASIC19.08■□□□□ 0.64
USH1GQ495M9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.08■□□□□ 0.64
USH1GQ495M9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AP001059.3-201ENST00000619053 235 ntBASIC19.08■□□□□ 0.64
USH1GQ495M9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.08■□□□□ 0.64
USH1GQ495M9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AC084121.4-201ENST00000641598 221 ntBASIC19.08■□□□□ 0.64
USH1GQ495M9 AF228730.8-201ENST00000642140 221 ntBASIC19.08■□□□□ 0.64
USH1GQ495M9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
USH1GQ495M9 AL512652.2-201ENST00000625156 1716 ntBASIC19.08■□□□□ 0.64
USH1GQ495M9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.08■□□□□ 0.64
USH1GQ495M9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.08■□□□□ 0.64
USH1GQ495M9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USH1GQ495M9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 MIR346-201ENST00000362234 95 ntBASIC19.07■□□□□ 0.64
USH1GQ495M9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.07■□□□□ 0.64
USH1GQ495M9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.07■□□□□ 0.64
USH1GQ495M9 ALG1L8P-201ENST00000533887 760 ntBASIC19.07■□□□□ 0.64
USH1GQ495M9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.07■□□□□ 0.64
USH1GQ495M9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.07■□□□□ 0.64
USH1GQ495M9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.07■□□□□ 0.64
USH1GQ495M9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
USH1GQ495M9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USH1GQ495M9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.06■□□□□ 0.64
USH1GQ495M9 AC008677.1-201ENST00000519230 1561 ntBASIC19.06■□□□□ 0.64
USH1GQ495M9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USH1GQ495M9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
USH1GQ495M9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USH1GQ495M9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.06■□□□□ 0.64
USH1GQ495M9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.06■□□□□ 0.64
USH1GQ495M9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.06■□□□□ 0.64
USH1GQ495M9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.06■□□□□ 0.64
USH1GQ495M9 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.06■□□□□ 0.64
USH1GQ495M9 MIR770-201ENST00000390219 98 ntBASIC19.06■□□□□ 0.64
USH1GQ495M9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USH1GQ495M9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.06■□□□□ 0.64
USH1GQ495M9 CNN2P2-201ENST00000443536 909 ntBASIC19.06■□□□□ 0.64
USH1GQ495M9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms