Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM71Q2Q1W2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AC138969.3-201ENST00000546612 1459 ntBASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AC138932.2-201ENST00000548268 1459 ntBASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AC126755.4-201ENST00000549796 1459 ntBASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 KRT17P7-201ENST00000451704 1104 ntBASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 AC061975.2-201ENST00000581722 295 ntBASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM71Q2Q1W2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM71Q2Q1W2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 RN7SL618P-201ENST00000477850 296 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 AC044860.1-202ENST00000559481 777 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CHCHD2P3-201ENST00000603038 451 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 IGHV3-72-202ENST00000621503 303 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 NOC2LP2-201ENST00000407594 1944 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 AL589702.1-201ENST00000641229 1509 ntBASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRIM71Q2Q1W2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 PP12613-201ENST00000424958 2230 ntBASIC18■□□□□ 0.47
TRIM71Q2Q1W2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 AC098614.1-201ENST00000368528 745 ntBASIC18■□□□□ 0.47
TRIM71Q2Q1W2 SPDYE17-201ENST00000412399 783 ntBASIC18■□□□□ 0.47
TRIM71Q2Q1W2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 AC114501.2-201ENST00000439631 535 ntBASIC18■□□□□ 0.47
TRIM71Q2Q1W2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18■□□□□ 0.47
TRIM71Q2Q1W2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms