Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.45■□□□□ 0.38
CBX1P83916 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.45■□□□□ 0.38
CBX1P83916 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.45■□□□□ 0.38
CBX1P83916 AC133552.2-202ENST00000575694 574 ntBASIC17.45■□□□□ 0.38
CBX1P83916 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.45■□□□□ 0.38
CBX1P83916 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.45■□□□□ 0.38
CBX1P83916 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CBX1P83916 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CBX1P83916 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CBX1P83916 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.45■□□□□ 0.38
CBX1P83916 AL139385.1-201ENST00000611744 3272 ntBASIC17.45■□□□□ 0.38
CBX1P83916 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.44■□□□□ 0.38
CBX1P83916 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.44■□□□□ 0.38
CBX1P83916 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.44■□□□□ 0.38
CBX1P83916 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CBX1P83916 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.44■□□□□ 0.38
CBX1P83916 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CBX1P83916 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX1P83916 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.43■□□□□ 0.38
CBX1P83916 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX1P83916 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX1P83916 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.43■□□□□ 0.38
CBX1P83916 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.43■□□□□ 0.38
CBX1P83916 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CBX1P83916 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.42■□□□□ 0.38
CBX1P83916 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
CBX1P83916 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.42■□□□□ 0.38
CBX1P83916 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CBX1P83916 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms