Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19■□□□□ 0.63
HTRA3P83110 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19■□□□□ 0.63
HTRA3P83110 AL136301.1-201ENST00000615830 422 ntBASIC19■□□□□ 0.63
HTRA3P83110 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 LYSMD4-203ENST00000378904 2122 ntBASIC19■□□□□ 0.63
HTRA3P83110 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HTRA3P83110 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HTRA3P83110 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.99■□□□□ 0.63
HTRA3P83110 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.99■□□□□ 0.63
HTRA3P83110 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.99■□□□□ 0.63
HTRA3P83110 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HTRA3P83110 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HTRA3P83110 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 FAM86LP-201ENST00000478302 853 ntBASIC18.99■□□□□ 0.63
HTRA3P83110 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.99■□□□□ 0.63
HTRA3P83110 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.99■□□□□ 0.63
HTRA3P83110 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.99■□□□□ 0.63
HTRA3P83110 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.99■□□□□ 0.63
HTRA3P83110 AC061975.2-201ENST00000581722 295 ntBASIC18.99■□□□□ 0.63
HTRA3P83110 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HTRA3P83110 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTRA3P83110 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.98■□□□□ 0.63
HTRA3P83110 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
HTRA3P83110 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.98■□□□□ 0.63
HTRA3P83110 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 CNN2P8-201ENST00000421872 913 ntBASIC18.98■□□□□ 0.63
HTRA3P83110 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
HTRA3P83110 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.98■□□□□ 0.63
HTRA3P83110 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HTRA3P83110 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.98■□□□□ 0.63
HTRA3P83110 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTRA3P83110 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.98■□□□□ 0.63
HTRA3P83110 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HTRA3P83110 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HTRA3P83110 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.97■□□□□ 0.63
HTRA3P83110 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.97■□□□□ 0.63
HTRA3P83110 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.97■□□□□ 0.63
HTRA3P83110 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.97■□□□□ 0.63
HTRA3P83110 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.97■□□□□ 0.63
HTRA3P83110 AC009084.3-201ENST00000623356 437 ntBASIC18.97■□□□□ 0.63
HTRA3P83110 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HTRA3P83110 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HTRA3P83110 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.97■□□□□ 0.63
HTRA3P83110 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HTRA3P83110 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.96■□□□□ 0.63
HTRA3P83110 AL031598.1-201ENST00000561511 1773 ntBASIC18.96■□□□□ 0.63
HTRA3P83110 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTRA3P83110 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.96■□□□□ 0.63
HTRA3P83110 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HTRA3P83110 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HTRA3P83110 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HTRA3P83110 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms