Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEP78395 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEP78395 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 AC006538.1-201ENST00000567905 1585 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 AL391005.1-201ENST00000623953 2435 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PRAMEP78395 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.85■□□□□ 0.29
PRAMEP78395 AP002469.2-201ENST00000531724 424 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 AL160237.2-201ENST00000556165 472 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 AC091167.2-201ENST00000579581 588 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 AL139011.1-202ENST00000642063 584 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 AC129492.6-201ENST00000611383 1305 ntBASIC16.85■□□□□ 0.29
PRAMEP78395 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEP78395 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
PRAMEP78395 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEP78395 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEP78395 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 AC131009.4-201ENST00000624048 1740 ntBASIC16.84■□□□□ 0.29
PRAMEP78395 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
PRAMEP78395 DOC2GP-204ENST00000639052 2548 ntBASIC16.84■□□□□ 0.29
PRAMEP78395 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEP78395 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEP78395 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.84■□□□□ 0.29
PRAMEP78395 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEP78395 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEP78395 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PRAMEP78395 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEP78395 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.83■□□□□ 0.29
PRAMEP78395 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PRAMEP78395 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEP78395 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEP78395 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PRAMEP78395 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEP78395 MRPL20P1-201ENST00000400819 433 ntBASIC16.83■□□□□ 0.28
PRAMEP78395 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 AL031284.1-201ENST00000419297 478 ntBASIC16.83■□□□□ 0.28
PRAMEP78395 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms