Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 DOC2GP-204ENST00000639052 2548 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 ME2P1-201ENST00000426028 1970 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 GGT4P-201ENST00000623672 1708 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.61■□□□□ 0.57
ASIC1P78348 FAM185BP-201ENST00000443595 716 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ASIC1P78348 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.61■□□□□ 0.57
ASIC1P78348 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.61■□□□□ 0.57
ASIC1P78348 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ASIC1P78348 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ASIC1P78348 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.6■□□□□ 0.57
ASIC1P78348 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ASIC1P78348 AC012569.1-201ENST00000591191 1524 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ASIC1P78348 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 VN2R19P-201ENST00000442399 1052 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 CXCL1P1-201ENST00000502804 216 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 IGHV3-22-201ENST00000520721 359 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.6■□□□□ 0.57
ASIC1P78348 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 AL121894.2-201ENST00000602977 491 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.6■□□□□ 0.57
ASIC1P78348 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 AC018695.7-201ENST00000624587 2492 ntBASIC18.6■□□□□ 0.57
ASIC1P78348 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ASIC1P78348 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ASIC1P78348 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.59■□□□□ 0.57
ASIC1P78348 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.59■□□□□ 0.57
ASIC1P78348 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ASIC1P78348 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ASIC1P78348 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms