Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL671277.2-201ENST00000458060 996 ntBASIC15.23■□□□□ 0.03
CXCR4P61073 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.23■□□□□ 0.03
CXCR4P61073 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.23■□□□□ 0.03
CXCR4P61073 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 AC090616.6-201ENST00000582640 721 ntBASIC15.23■□□□□ 0.03
CXCR4P61073 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.23■□□□□ 0.03
CXCR4P61073 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.23■□□□□ 0.03
CXCR4P61073 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CXCR4P61073 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CXCR4P61073 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CXCR4P61073 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.22■□□□□ 0.03
CXCR4P61073 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.22■□□□□ 0.03
CXCR4P61073 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.22■□□□□ 0.03
CXCR4P61073 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.22■□□□□ 0.03
CXCR4P61073 AC063952.2-201ENST00000498792 1227 ntBASIC15.22■□□□□ 0.03
CXCR4P61073 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CXCR4P61073 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.22■□□□□ 0.03
CXCR4P61073 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CXCR4P61073 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.22■□□□□ 0.03
CXCR4P61073 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CXCR4P61073 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.21■□□□□ 0.03
CXCR4P61073 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CXCR4P61073 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CXCR4P61073 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CXCR4P61073 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 AC104076.2-201ENST00000448912 469 ntBASIC15.21■□□□□ 0.03
CXCR4P61073 POU5F1P6-201ENST00000466990 990 ntBASIC15.21■□□□□ 0.03
CXCR4P61073 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.21■□□□□ 0.03
CXCR4P61073 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.21■□□□□ 0.03
CXCR4P61073 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.21■□□□□ 0.03
CXCR4P61073 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CXCR4P61073 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CXCR4P61073 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms