Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN12P56749 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN12P56749 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN12P56749 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN12P56749 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 AC073347.1-201ENST00000421633 2643 ntBASIC14.55□□□□□ -0.08
CLDN12P56749 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLDN12P56749 AL645929.1-201ENST00000420084 975 ntBASIC14.55□□□□□ -0.08
CLDN12P56749 AC092647.4-201ENST00000457211 535 ntBASIC14.55□□□□□ -0.08
CLDN12P56749 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN12P56749 AC009533.2-201ENST00000543664 586 ntBASIC14.55□□□□□ -0.08
CLDN12P56749 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN12P56749 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN12P56749 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 AC073508.3-201ENST00000619697 1419 ntBASIC14.55□□□□□ -0.08
CLDN12P56749 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN12P56749 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN12P56749 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN12P56749 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN12P56749 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN12P56749 KRT18P57-201ENST00000443599 1254 ntBASIC14.54□□□□□ -0.08
CLDN12P56749 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN12P56749 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN12P56749 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN12P56749 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 AC006277.1-201ENST00000624348 1610 ntBASIC14.54□□□□□ -0.08
CLDN12P56749 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 GGT3P-204ENST00000453783 1664 ntBASIC14.54□□□□□ -0.08
CLDN12P56749 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 GGT4P-201ENST00000623672 1708 ntBASIC14.54□□□□□ -0.08
CLDN12P56749 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
CLDN12P56749 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN12P56749 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN12P56749 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN12P56749 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLDN12P56749 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN12P56749 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms