Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.8■□□□□ 0.44
SSR1P43307 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.8■□□□□ 0.44
SSR1P43307 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.8■□□□□ 0.44
SSR1P43307 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.8■□□□□ 0.44
SSR1P43307 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SSR1P43307 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.8■□□□□ 0.44
SSR1P43307 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSR1P43307 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.79■□□□□ 0.44
SSR1P43307 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.79■□□□□ 0.44
SSR1P43307 FGFR3P6-201ENST00000457012 610 ntBASIC17.79■□□□□ 0.44
SSR1P43307 SCARNA2-201ENST00000458748 420 ntBASIC17.79■□□□□ 0.44
SSR1P43307 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
SSR1P43307 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.79■□□□□ 0.44
SSR1P43307 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 AC008741.2-201ENST00000612792 3115 ntBASIC17.79■□□□□ 0.44
SSR1P43307 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SSR1P43307 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SSR1P43307 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSR1P43307 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.79■□□□□ 0.44
SSR1P43307 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 AP002414.1-201ENST00000391405 1147 ntBASIC17.78■□□□□ 0.44
SSR1P43307 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.78■□□□□ 0.44
SSR1P43307 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.78■□□□□ 0.44
SSR1P43307 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 TERC-201ENST00000602385 541 ntBASIC17.78■□□□□ 0.44
SSR1P43307 AL139424.1-201ENST00000607572 797 ntBASIC17.78■□□□□ 0.44
SSR1P43307 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.78■□□□□ 0.44
SSR1P43307 AL589182.2-201ENST00000619332 1049 ntBASIC17.78■□□□□ 0.44
SSR1P43307 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SSR1P43307 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SSR1P43307 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms