Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL15A1P39059 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.9■□□□□ 0.94
COL15A1P39059 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL15A1P39059 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.9■□□□□ 0.94
COL15A1P39059 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.9■□□□□ 0.94
COL15A1P39059 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL15A1P39059 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.9■□□□□ 0.94
COL15A1P39059 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.9■□□□□ 0.94
COL15A1P39059 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL15A1P39059 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL15A1P39059 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL15A1P39059 AL391825.1-201ENST00000457671 1364 ntBASIC20.89■□□□□ 0.94
COL15A1P39059 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.89■□□□□ 0.94
COL15A1P39059 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.89■□□□□ 0.94
COL15A1P39059 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.89■□□□□ 0.94
COL15A1P39059 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL15A1P39059 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL15A1P39059 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.89■□□□□ 0.93
COL15A1P39059 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 AP006294.1-201ENST00000415407 339 ntBASIC20.89■□□□□ 0.93
COL15A1P39059 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.89■□□□□ 0.93
COL15A1P39059 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.89■□□□□ 0.93
COL15A1P39059 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.89■□□□□ 0.93
COL15A1P39059 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.89■□□□□ 0.93
COL15A1P39059 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL15A1P39059 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.89■□□□□ 0.93
COL15A1P39059 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.89■□□□□ 0.93
COL15A1P39059 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
COL15A1P39059 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.89■□□□□ 0.93
COL15A1P39059 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL15A1P39059 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 KRT8P39-201ENST00000396270 1433 ntBASIC20.88■□□□□ 0.93
COL15A1P39059 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
COL15A1P39059 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.88■□□□□ 0.93
COL15A1P39059 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.88■□□□□ 0.93
COL15A1P39059 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.88■□□□□ 0.93
COL15A1P39059 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.88■□□□□ 0.93
COL15A1P39059 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COL15A1P39059 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
COL15A1P39059 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.88■□□□□ 0.93
COL15A1P39059 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 SPDYE19P-201ENST00000338590 713 ntBASIC20.87■□□□□ 0.93
COL15A1P39059 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
COL15A1P39059 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.87■□□□□ 0.93
COL15A1P39059 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COL15A1P39059 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.87■□□□□ 0.93
COL15A1P39059 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.87■□□□□ 0.93
COL15A1P39059 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 AC093004.1-201ENST00000508850 424 ntBASIC20.87■□□□□ 0.93
COL15A1P39059 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.87■□□□□ 0.93
COL15A1P39059 AC044860.1-202ENST00000559481 777 ntBASIC20.87■□□□□ 0.93
COL15A1P39059 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.87■□□□□ 0.93
COL15A1P39059 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms