Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
APEX1P27695 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APEX1P27695 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APEX1P27695 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
APEX1P27695 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
APEX1P27695 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APEX1P27695 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
APEX1P27695 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.13■□□□□ 0.01
APEX1P27695 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.13■□□□□ 0.01
APEX1P27695 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 AF238378.1-201ENST00000526806 358 ntBASIC15.13■□□□□ 0.01
APEX1P27695 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
APEX1P27695 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.13■□□□□ 0.01
APEX1P27695 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.13■□□□□ 0.01
APEX1P27695 AL355877.3-201ENST00000622820 899 ntBASIC15.13■□□□□ 0.01
APEX1P27695 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
APEX1P27695 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
APEX1P27695 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
APEX1P27695 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
APEX1P27695 AL135999.2-201ENST00000622438 1686 ntBASIC15.12■□□□□ 0.01
APEX1P27695 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 AL022342.1-201ENST00000400363 863 ntBASIC15.12■□□□□ 0.01
APEX1P27695 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
APEX1P27695 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 SIGLEC30P-201ENST00000455569 941 ntBASIC15.12■□□□□ 0.01
APEX1P27695 BX005266.1-201ENST00000473402 457 ntBASIC15.12■□□□□ 0.01
APEX1P27695 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.12■□□□□ 0.01
APEX1P27695 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.12■□□□□ 0.01
APEX1P27695 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
APEX1P27695 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
APEX1P27695 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.12■□□□□ 0.01
APEX1P27695 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
APEX1P27695 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.12■□□□□ 0.01
APEX1P27695 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.11■□□□□ 0.01
APEX1P27695 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.11■□□□□ 0.01
APEX1P27695 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APEX1P27695 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APEX1P27695 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APEX1P27695 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
APEX1P27695 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
APEX1P27695 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
APEX1P27695 SIGLEC16-201ENST00000599858 1437 ntBASIC15.11■□□□□ 0.01
APEX1P27695 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms