Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 KRT18P27-201ENST00000427733 1299 ntBASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 OR7E14P-202ENST00000530490 1290 ntBASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HNRNPCL4P0DMR1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 AL031731.1-201ENST00000642131 2094 ntBASIC15.52■□□□□ 0.07
HNRNPCL4P0DMR1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC073621.1-201ENST00000392730 636 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 PMS2P1-201ENST00000431037 1228 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC073648.2-201ENST00000510116 352 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC136632.2-201ENST00000512891 861 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC005412.3-201ENST00000580309 715 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 CYP2A7P1-201ENST00000595391 815 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 SLC22A20-204ENST00000530038 1673 ntBASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HNRNPCL4P0DMR1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HNRNPCL4P0DMR1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms