Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2BFMP0C1H6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 PTCHD3P3-201ENST00000403073 906 ntBASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 AC087163.2-201ENST00000457299 853 ntBASIC14.75□□□□□ -0.05
H2BFMP0C1H6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2BFMP0C1H6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 AL139384.1-201ENST00000612143 3047 ntBASIC14.74□□□□□ -0.05
H2BFMP0C1H6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 TSPY19P-201ENST00000418461 509 ntBASIC14.74□□□□□ -0.05
H2BFMP0C1H6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 TSPY18P-201ENST00000441642 509 ntBASIC14.74□□□□□ -0.05
H2BFMP0C1H6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 MPDU1-223ENST00000582151 728 ntBASIC14.74□□□□□ -0.05
H2BFMP0C1H6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.74□□□□□ -0.05
H2BFMP0C1H6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms