Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL1A1P02452 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.84■□□□□ 0.77
COL1A1P02452 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.84■□□□□ 0.77
COL1A1P02452 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.84■□□□□ 0.77
COL1A1P02452 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 PCGF3-213ENST00000620529 1899 ntBASIC19.84■□□□□ 0.77
COL1A1P02452 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.84■□□□□ 0.77
COL1A1P02452 AC004840.1-201ENST00000636359 365 ntBASIC19.84■□□□□ 0.77
COL1A1P02452 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.84■□□□□ 0.77
COL1A1P02452 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COL1A1P02452 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.83■□□□□ 0.77
COL1A1P02452 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COL1A1P02452 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.83■□□□□ 0.77
COL1A1P02452 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL1A1P02452 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.83■□□□□ 0.76
COL1A1P02452 AC009407.1-201ENST00000568958 598 ntBASIC19.83■□□□□ 0.76
COL1A1P02452 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.83■□□□□ 0.76
COL1A1P02452 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
COL1A1P02452 AC022211.2-201ENST00000585075 2527 ntBASIC19.83■□□□□ 0.76
COL1A1P02452 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL1A1P02452 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.83■□□□□ 0.76
COL1A1P02452 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.82■□□□□ 0.76
COL1A1P02452 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL1A1P02452 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 KRT17P7-201ENST00000451704 1104 ntBASIC19.82■□□□□ 0.76
COL1A1P02452 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A1P02452 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL1A1P02452 AL512361.1-201ENST00000554200 418 ntBASIC19.82■□□□□ 0.76
COL1A1P02452 AL079307.3-201ENST00000556114 283 ntBASIC19.82■□□□□ 0.76
COL1A1P02452 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A1P02452 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A1P02452 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL1A1P02452 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.82■□□□□ 0.76
COL1A1P02452 CETN4P-206ENST00000642099 2168 ntBASIC19.82■□□□□ 0.76
COL1A1P02452 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL1A1P02452 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL1A1P02452 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.81■□□□□ 0.76
COL1A1P02452 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
COL1A1P02452 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL1A1P02452 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL1A1P02452 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.81■□□□□ 0.76
COL1A1P02452 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.81■□□□□ 0.76
COL1A1P02452 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A1P02452 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.81■□□□□ 0.76
COL1A1P02452 AC140912.1-201ENST00000577171 1054 ntBASIC19.81■□□□□ 0.76
COL1A1P02452 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms