Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
BEST1O76090 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST1O76090 TSEN15P1-201ENST00000423257 515 ntBASIC17.43■□□□□ 0.38
BEST1O76090 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 IGHV3-62-201ENST00000520057 340 ntBASIC17.43■□□□□ 0.38
BEST1O76090 SLC25A39P2-201ENST00000537614 270 ntBASIC17.43■□□□□ 0.38
BEST1O76090 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.43■□□□□ 0.38
BEST1O76090 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.43■□□□□ 0.38
BEST1O76090 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 AC009093.7-201ENST00000623853 1223 ntBASIC17.43■□□□□ 0.38
BEST1O76090 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
BEST1O76090 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST1O76090 ALOX12P2-203ENST00000570921 1945 ntBASIC17.43■□□□□ 0.38
BEST1O76090 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST1O76090 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST1O76090 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 AC079328.2-201ENST00000561241 3354 ntBASIC17.42■□□□□ 0.38
BEST1O76090 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.42■□□□□ 0.38
BEST1O76090 KRT18P32-201ENST00000424695 1287 ntBASIC17.42■□□□□ 0.38
BEST1O76090 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 HLA-J-203ENST00000494367 1087 ntBASIC17.42■□□□□ 0.38
BEST1O76090 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 KRT8P23-201ENST00000560090 1207 ntBASIC17.42■□□□□ 0.38
BEST1O76090 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.42■□□□□ 0.38
BEST1O76090 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.42■□□□□ 0.38
BEST1O76090 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
BEST1O76090 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BEST1O76090 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
BEST1O76090 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.41■□□□□ 0.38
BEST1O76090 AC020916.1-201ENST00000587762 1774 ntBASIC17.41■□□□□ 0.38
BEST1O76090 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BEST1O76090 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.41■□□□□ 0.38
BEST1O76090 PMS2P2-201ENST00000425039 1128 ntBASIC17.41■□□□□ 0.38
BEST1O76090 AC142381.1-201ENST00000426099 345 ntBASIC17.41■□□□□ 0.38
BEST1O76090 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms