Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC078925.2-201ENST00000624013 1973 ntBASIC16.77■□□□□ 0.28
GPC4O75487 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GPC4O75487 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GPC4O75487 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
GPC4O75487 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 DUX4L17-201ENST00000557360 1267 ntBASIC16.77■□□□□ 0.28
GPC4O75487 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.77■□□□□ 0.28
GPC4O75487 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GPC4O75487 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GPC4O75487 AP002414.3-201ENST00000589352 1468 ntBASIC16.77■□□□□ 0.28
GPC4O75487 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.77■□□□□ 0.28
GPC4O75487 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.77■□□□□ 0.27
GPC4O75487 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
GPC4O75487 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.77■□□□□ 0.27
GPC4O75487 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
GPC4O75487 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GPC4O75487 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GPC4O75487 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC4O75487 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GPC4O75487 HLA-A-201ENST00000376802 1334 ntBASIC16.76■□□□□ 0.27
GPC4O75487 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC4O75487 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 FDX1P1-201ENST00000449115 551 ntBASIC16.76■□□□□ 0.27
GPC4O75487 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.76■□□□□ 0.27
GPC4O75487 RPS15P9-201ENST00000494093 319 ntBASIC16.76■□□□□ 0.27
GPC4O75487 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC4O75487 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.76■□□□□ 0.27
GPC4O75487 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC4O75487 AP001005.1-201ENST00000571755 1248 ntBASIC16.76■□□□□ 0.27
GPC4O75487 AL356488.2-201ENST00000602755 427 ntBASIC16.76■□□□□ 0.27
GPC4O75487 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.76■□□□□ 0.27
GPC4O75487 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 AF228730.7-201ENST00000641842 219 ntBASIC16.76■□□□□ 0.27
GPC4O75487 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 AC067930.6-201ENST00000623257 4947 ntBASIC16.76■□□□□ 0.27
GPC4O75487 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GPC4O75487 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GPC4O75487 AC126755.1-201ENST00000525846 6405 ntBASIC16.75■□□□□ 0.27
GPC4O75487 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC4O75487 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC4O75487 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 TSPY26P-202ENST00000565928 3884 ntBASIC16.75■□□□□ 0.27
GPC4O75487 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC4O75487 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.75■□□□□ 0.27
GPC4O75487 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.75■□□□□ 0.27
GPC4O75487 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC4O75487 PGM5P2-202ENST00000637225 1043 ntBASIC16.75■□□□□ 0.27
GPC4O75487 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GPC4O75487 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms