Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.82□□□□□ -0.04
SGCEO43556 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SGCEO43556 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SGCEO43556 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 AL645728.1-201ENST00000366221 2101 ntBASIC14.81□□□□□ -0.04
SGCEO43556 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 AL391256.1-201ENST00000443260 1855 ntBASIC14.81□□□□□ -0.04
SGCEO43556 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 HNRNPDP1-201ENST00000439535 754 ntBASIC14.81□□□□□ -0.04
SGCEO43556 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.81□□□□□ -0.04
SGCEO43556 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SGCEO43556 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.81□□□□□ -0.04
SGCEO43556 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.81□□□□□ -0.04
SGCEO43556 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 AL356488.2-201ENST00000602755 427 ntBASIC14.81□□□□□ -0.04
SGCEO43556 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 PGM5P2-202ENST00000637225 1043 ntBASIC14.81□□□□□ -0.04
SGCEO43556 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 TOP3BP1-201ENST00000420768 1380 ntBASIC14.81□□□□□ -0.04
SGCEO43556 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.81□□□□□ -0.04
SGCEO43556 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 AC023824.1-201ENST00000562945 2975 ntBASIC14.81□□□□□ -0.04
SGCEO43556 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SGCEO43556 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.81□□□□□ -0.04
SGCEO43556 TCAF2P1-201ENST00000291129 2421 ntBASIC14.81□□□□□ -0.04
SGCEO43556 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.8□□□□□ -0.04
SGCEO43556 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SGCEO43556 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.8□□□□□ -0.04
SGCEO43556 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.8□□□□□ -0.04
SGCEO43556 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.8□□□□□ -0.04
SGCEO43556 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.8□□□□□ -0.04
SGCEO43556 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.8□□□□□ -0.04
SGCEO43556 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.8□□□□□ -0.04
SGCEO43556 AL773604.1-201ENST00000617417 272 ntBASIC14.8□□□□□ -0.04
SGCEO43556 AC148477.8-201ENST00000624298 468 ntBASIC14.8□□□□□ -0.04
SGCEO43556 AC005593.1-201ENST00000624894 515 ntBASIC14.8□□□□□ -0.04
SGCEO43556 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.8□□□□□ -0.04
SGCEO43556 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 AC002310.6-201ENST00000624451 1377 ntBASIC14.8□□□□□ -0.04
SGCEO43556 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SGCEO43556 LINC00895-201ENST00000629028 1637 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms