Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SRGAP3O43295 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
SRGAP3O43295 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRGAP3O43295 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SRGAP3O43295 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRGAP3O43295 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.64■□□□□ 0.9
SRGAP3O43295 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.64■□□□□ 0.9
SRGAP3O43295 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
SRGAP3O43295 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.64■□□□□ 0.89
SRGAP3O43295 RN7SL589P-201ENST00000481268 310 ntBASIC20.64■□□□□ 0.89
SRGAP3O43295 AC079140.1-201ENST00000508039 487 ntBASIC20.64■□□□□ 0.89
SRGAP3O43295 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.64■□□□□ 0.89
SRGAP3O43295 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.64■□□□□ 0.89
SRGAP3O43295 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.64■□□□□ 0.89
SRGAP3O43295 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.64■□□□□ 0.89
SRGAP3O43295 AL596442.2-201ENST00000610240 980 ntBASIC20.64■□□□□ 0.89
SRGAP3O43295 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.64■□□□□ 0.89
SRGAP3O43295 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRGAP3O43295 GGT3P-204ENST00000453783 1664 ntBASIC20.64■□□□□ 0.89
SRGAP3O43295 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SRGAP3O43295 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.64■□□□□ 0.89
SRGAP3O43295 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 AC004461.1-201ENST00000412461 403 ntBASIC20.63■□□□□ 0.89
SRGAP3O43295 KRT18P34-201ENST00000488218 1270 ntBASIC20.63■□□□□ 0.89
SRGAP3O43295 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.63■□□□□ 0.89
SRGAP3O43295 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.63■□□□□ 0.89
SRGAP3O43295 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.63■□□□□ 0.89
SRGAP3O43295 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.63■□□□□ 0.89
SRGAP3O43295 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRGAP3O43295 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.63■□□□□ 0.89
SRGAP3O43295 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.63■□□□□ 0.89
SRGAP3O43295 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 AC079328.2-201ENST00000561241 3354 ntBASIC20.62■□□□□ 0.89
SRGAP3O43295 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRGAP3O43295 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SRGAP3O43295 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.62■□□□□ 0.89
SRGAP3O43295 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRGAP3O43295 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.62■□□□□ 0.89
SRGAP3O43295 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.62■□□□□ 0.89
SRGAP3O43295 AC254562.1-201ENST00000417586 456 ntBASIC20.62■□□□□ 0.89
SRGAP3O43295 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SRGAP3O43295 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.62■□□□□ 0.89
SRGAP3O43295 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.62■□□□□ 0.89
SRGAP3O43295 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRGAP3O43295 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.62■□□□□ 0.89
SRGAP3O43295 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRGAP3O43295 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.62■□□□□ 0.89
SRGAP3O43295 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.61■□□□□ 0.89
SRGAP3O43295 PCDHA14-201ENST00000506751 2298 ntBASIC20.61■□□□□ 0.89
SRGAP3O43295 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.61■□□□□ 0.89
SRGAP3O43295 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SRGAP3O43295 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRGAP3O43295 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SRGAP3O43295 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.61■□□□□ 0.89
SRGAP3O43295 SPCS2P4-201ENST00000436160 681 ntBASIC20.61■□□□□ 0.89
SRGAP3O43295 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.61■□□□□ 0.89
SRGAP3O43295 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms