Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC22.71■■□□□ 1.23
CHD2O14647 AL049840.4-201ENST00000602422 811 ntBASIC22.71■■□□□ 1.23
CHD2O14647 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHD2O14647 AL512652.2-201ENST00000625156 1716 ntBASIC22.71■■□□□ 1.23
CHD2O14647 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.23
CHD2O14647 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.23
CHD2O14647 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.7■■□□□ 1.23
CHD2O14647 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CHD2O14647 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CHD2O14647 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC22.7■■□□□ 1.22
CHD2O14647 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC22.7■■□□□ 1.22
CHD2O14647 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CHD2O14647 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.7■■□□□ 1.22
CHD2O14647 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHD2O14647 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD2O14647 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 MGST3-203ENST00000367885 680 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD2O14647 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHD2O14647 AL355864.2-201ENST00000447420 863 ntBASIC22.69■■□□□ 1.22
CHD2O14647 AC106760.1-201ENST00000508690 800 ntBASIC22.69■■□□□ 1.22
CHD2O14647 RNA5SP423-201ENST00000517127 109 ntBASIC22.69■■□□□ 1.22
CHD2O14647 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC22.69■■□□□ 1.22
CHD2O14647 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD2O14647 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD2O14647 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD2O14647 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC22.69■■□□□ 1.22
CHD2O14647 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHD2O14647 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.69■■□□□ 1.22
CHD2O14647 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHD2O14647 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD2O14647 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 BCRP2-202ENST00000447763 634 ntBASIC22.68■■□□□ 1.22
CHD2O14647 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 BCRP6-201ENST00000510112 632 ntBASIC22.68■■□□□ 1.22
CHD2O14647 BCRP7-201ENST00000511549 544 ntBASIC22.68■■□□□ 1.22
CHD2O14647 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC22.68■■□□□ 1.22
CHD2O14647 TIMM17BP1-201ENST00000545713 516 ntBASIC22.68■■□□□ 1.22
CHD2O14647 SPIB-207ENST00000597855 564 ntTSL 4 BASIC22.68■■□□□ 1.22
CHD2O14647 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHD2O14647 LOX-206ENST00000639739 1626 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD2O14647 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 PCDHB17P-201ENST00000539533 2393 ntBASIC22.68■■□□□ 1.22
CHD2O14647 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHD2O14647 AC008764.6-201ENST00000595909 2069 ntBASIC22.68■■□□□ 1.22
CHD2O14647 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD2O14647 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD2O14647 RPL13AP20-201ENST00000459725 609 ntBASIC22.68■■□□□ 1.22
CHD2O14647 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC22.68■■□□□ 1.22
CHD2O14647 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC22.68■■□□□ 1.22
CHD2O14647 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC22.68■■□□□ 1.22
CHD2O14647 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHD2O14647 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CHD2O14647 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 AC092053.1-201ENST00000605787 1936 ntBASIC22.67■■□□□ 1.22
CHD2O14647 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD2O14647 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD2O14647 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CHD2O14647 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD2O14647 NME4-207ENST00000450036 985 ntTSL 3 BASIC22.67■■□□□ 1.22
CHD2O14647 IGHJ2P-201ENST00000454480 60 ntBASIC22.67■■□□□ 1.22
CHD2O14647 AL359711.2-201ENST00000563105 872 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms