Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
E2F3O00716 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
E2F3O00716 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.29■□□□□ 0.2
E2F3O00716 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
E2F3O00716 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
E2F3O00716 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.28■□□□□ 0.2
E2F3O00716 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.28■□□□□ 0.2
E2F3O00716 IGHV3-22-201ENST00000520721 359 ntBASIC16.28■□□□□ 0.2
E2F3O00716 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.28■□□□□ 0.2
E2F3O00716 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.28■□□□□ 0.2
E2F3O00716 AC008667.4-201ENST00000607370 168 ntBASIC16.28■□□□□ 0.2
E2F3O00716 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
E2F3O00716 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.28■□□□□ 0.2
E2F3O00716 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
E2F3O00716 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.28■□□□□ 0.2
E2F3O00716 AL353732.1-201ENST00000569618 1459 ntBASIC16.28■□□□□ 0.2
E2F3O00716 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
E2F3O00716 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
E2F3O00716 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.27■□□□□ 0.2
E2F3O00716 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 RPS2P28-201ENST00000314255 741 ntBASIC16.27■□□□□ 0.2
E2F3O00716 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.27■□□□□ 0.2
E2F3O00716 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.27■□□□□ 0.2
E2F3O00716 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.27■□□□□ 0.2
E2F3O00716 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.27■□□□□ 0.2
E2F3O00716 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.27■□□□□ 0.2
E2F3O00716 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.27■□□□□ 0.2
E2F3O00716 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.27■□□□□ 0.2
E2F3O00716 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.27■□□□□ 0.2
E2F3O00716 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.27■□□□□ 0.2
E2F3O00716 CYP2A7P1-201ENST00000595391 815 ntBASIC16.27■□□□□ 0.2
E2F3O00716 AC008735.5-201ENST00000623544 497 ntBASIC16.27■□□□□ 0.2
E2F3O00716 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.27■□□□□ 0.2
E2F3O00716 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
E2F3O00716 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
E2F3O00716 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
E2F3O00716 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 AC104109.2-201ENST00000602919 1418 ntBASIC16.27■□□□□ 0.19
E2F3O00716 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
E2F3O00716 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
E2F3O00716 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
E2F3O00716 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
E2F3O00716 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
E2F3O00716 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 AC129492.6-201ENST00000611383 1305 ntBASIC16.26■□□□□ 0.19
E2F3O00716 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
E2F3O00716 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
E2F3O00716 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.26■□□□□ 0.19
E2F3O00716 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
E2F3O00716 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms