Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KPNA4O00629 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
KPNA4O00629 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KPNA4O00629 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
KPNA4O00629 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.68■□□□□ 0.1
KPNA4O00629 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
KPNA4O00629 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.68■□□□□ 0.1
KPNA4O00629 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.68■□□□□ 0.1
KPNA4O00629 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.68■□□□□ 0.1
KPNA4O00629 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.68■□□□□ 0.1
KPNA4O00629 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.68■□□□□ 0.1
KPNA4O00629 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KPNA4O00629 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 AL358472.4-201ENST00000633140 710 ntBASIC15.68■□□□□ 0.1
KPNA4O00629 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 INTS4P1-201ENST00000438455 1935 ntBASIC15.68■□□□□ 0.1
KPNA4O00629 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.68■□□□□ 0.1
KPNA4O00629 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KPNA4O00629 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 AC104819.1-201ENST00000504587 486 ntBASIC15.67■□□□□ 0.1
KPNA4O00629 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.67■□□□□ 0.1
KPNA4O00629 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.67■□□□□ 0.1
KPNA4O00629 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 AC069148.1-201ENST00000608741 768 ntBASIC15.67■□□□□ 0.1
KPNA4O00629 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 AC092119.3-201ENST00000612618 583 ntBASIC15.67■□□□□ 0.1
KPNA4O00629 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 AP000550.4-202ENST00000639755 178 ntBASIC15.67■□□□□ 0.1
KPNA4O00629 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 AC078925.2-201ENST00000624013 1973 ntBASIC15.67■□□□□ 0.1
KPNA4O00629 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.67■□□□□ 0.1
KPNA4O00629 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KPNA4O00629 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.67■□□□□ 0.1
KPNA4O00629 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KPNA4O00629 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KPNA4O00629 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
KPNA4O00629 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KPNA4O00629 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms