Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK2O00526 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.4□□□□□ -0.26
UPK2O00526 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK2O00526 SAPCD2P3-201ENST00000455031 850 ntBASIC13.4□□□□□ -0.26
UPK2O00526 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.4□□□□□ -0.26
UPK2O00526 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.4□□□□□ -0.26
UPK2O00526 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.4□□□□□ -0.26
UPK2O00526 CYP2A7P1-201ENST00000595391 815 ntBASIC13.4□□□□□ -0.26
UPK2O00526 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 GGTLC5P-201ENST00000617623 998 ntBASIC13.4□□□□□ -0.26
UPK2O00526 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.4□□□□□ -0.26
UPK2O00526 AP001350.2-201ENST00000625104 1094 ntBASIC13.4□□□□□ -0.26
UPK2O00526 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
UPK2O00526 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UPK2O00526 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.4□□□□□ -0.26
UPK2O00526 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UPK2O00526 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
UPK2O00526 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 AKR1C7P-201ENST00000305623 895 ntBASIC13.39□□□□□ -0.27
UPK2O00526 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK2O00526 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK2O00526 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.39□□□□□ -0.27
UPK2O00526 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK2O00526 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.39□□□□□ -0.27
UPK2O00526 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK2O00526 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 AC107918.4-202ENST00000641623 219 ntBASIC13.39□□□□□ -0.27
UPK2O00526 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
UPK2O00526 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 SLC22A20-204ENST00000530038 1673 ntBASIC13.39□□□□□ -0.27
UPK2O00526 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 AC046158.3-201ENST00000624947 2558 ntBASIC13.39□□□□□ -0.27
UPK2O00526 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
UPK2O00526 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UPK2O00526 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.39□□□□□ -0.27
UPK2O00526 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
UPK2O00526 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
UPK2O00526 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.39□□□□□ -0.27
UPK2O00526 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 AL596087.1-201ENST00000400979 1969 ntBASIC13.38□□□□□ -0.27
UPK2O00526 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UPK2O00526 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms