Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC105339.3-201ENST00000560043 636 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AL139424.1-201ENST00000607572 797 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 Z83851.2-201ENST00000609564 659 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AC055717.3-201ENST00000622967 595 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AC092364.2-201ENST00000596710 2692 ntBASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 MED15P5-201ENST00000423150 992 ntBASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DDX49Q9Y6V7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 AC068418.2-201ENST00000577309 3703 ntBASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
DDX49Q9Y6V7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX49Q9Y6V7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms