Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 LINC01101-201ENST00000622953 1884 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AC007191.1-201ENST00000623179 2995 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AC079781.5-202ENST00000641784 3743 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AC002558.1-201ENST00000488906 803 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 UNC93B4-201ENST00000505679 747 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AF201337.1-201ENST00000520239 748 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AL391807.1-203ENST00000604392 2365 ntBASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAPPC1Q9Y5R8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 AC136621.1-201ENST00000624017 2304 ntBASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAPPC1Q9Y5R8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms