Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 AL662844.4-201ENST00000606367 2838 ntBASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB3Q9Y5G1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AC022188.1-201ENST00000620960 1664 ntBASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AC021087.4-201ENST00000563761 564 ntBASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AL353135.1-201ENST00000606729 504 ntBASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 AC148477.8-201ENST00000624298 468 ntBASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB3Q9Y5G1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SART3-203ENST00000546611 1184 ntBASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 AL590787.1-201ENST00000568856 1315 ntBASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGB3Q9Y5G1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms