Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 IER3-202ENST00000376377 1350 ntBASIC16.26■□□□□ 0.19
PCDHGB4Q9UN71 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 NSUN5P1-202ENST00000421140 1535 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 NSUN5P2-203ENST00000457352 1529 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 POM121L3P-201ENST00000419331 1163 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AP002490.2-201ENST00000524791 560 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AP002414.4-201ENST00000589764 1148 ntBASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB4Q9UN71 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 AL020989.1-201ENST00000422979 469 ntBASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 AC104819.1-201ENST00000504587 486 ntBASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 TPSP2-201ENST00000561760 610 ntBASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB4Q9UN71 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB4Q9UN71 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms