Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 AL353593.2-201ENST00000602529 1483 ntBASIC18.33■□□□□ 0.52
CALCOCO1Q9P1Z2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 FAM45BP-202ENST00000592932 1624 ntBASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AP001005.1-201ENST00000571755 1248 ntBASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 GPALPP1-207ENST00000611650 899 ntBASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AC132938.5-201ENST00000624980 1813 ntBASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 AC092068.3-201ENST00000587894 2016 ntBASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CALCOCO1Q9P1Z2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 AC144831.1-201ENST00000573312 2656 ntBASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 AC068587.6-202ENST00000641839 5619 ntBASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 FAM197Y8-203ENST00000450145 560 ntBASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 AL773604.1-201ENST00000617417 272 ntBASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 AP000867.4-201ENST00000641616 219 ntBASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
CALCOCO1Q9P1Z2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms