Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 HLA-A-201ENST00000376802 1334 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 AC129492.6-201ENST00000611383 1305 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 MRPL3P1-201ENST00000400109 1033 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 AC139530.3-201ENST00000620344 690 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 PGM5P2-202ENST00000637225 1043 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 GGT3P-204ENST00000453783 1664 ntBASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 KRT8P39-201ENST00000396270 1433 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 SNX33P1-201ENST00000592116 1762 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 ALOX12P2-203ENST00000570921 1945 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 HCG4-201ENST00000418983 998 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC107918.2-201ENST00000530817 355 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 AC008735.5-201ENST00000623544 497 ntBASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.77■□□□□ 0.12
NEUROD4Q9HD90 MTHFR-217ENST00000641820 1569 ntBASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.77■□□□□ 0.11
NEUROD4Q9HD90 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.76■□□□□ 0.11
NEUROD4Q9HD90 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms