Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CBX8Q9HC52 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CBX8Q9HC52 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 SIGLEC16-201ENST00000599858 1437 ntBASIC18.66■□□□□ 0.58
CBX8Q9HC52 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 PRAL-201ENST00000624952 3286 ntBASIC18.66■□□□□ 0.58
CBX8Q9HC52 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CBX8Q9HC52 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CBX8Q9HC52 TOP3BP1-201ENST00000420768 1380 ntBASIC18.66■□□□□ 0.58
CBX8Q9HC52 KRT8P39-201ENST00000396270 1433 ntBASIC18.66■□□□□ 0.58
CBX8Q9HC52 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 AC096582.2-201ENST00000510860 516 ntBASIC18.65■□□□□ 0.58
CBX8Q9HC52 MIR4492-201ENST00000581627 80 ntBASIC18.65■□□□□ 0.58
CBX8Q9HC52 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 AC233702.3-201ENST00000578656 1387 ntBASIC18.65■□□□□ 0.58
CBX8Q9HC52 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBX8Q9HC52 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CBX8Q9HC52 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBX8Q9HC52 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.64■□□□□ 0.58
CBX8Q9HC52 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.64■□□□□ 0.58
CBX8Q9HC52 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBX8Q9HC52 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms