Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 PCGF3-213ENST00000620529 1899 ntBASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB1Q9H4B7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB1Q9H4B7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB1Q9H4B7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TUBB1Q9H4B7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB1Q9H4B7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB1Q9H4B7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB1Q9H4B7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 HCG4P8-203ENST00000443049 980 ntBASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 AF238378.1-201ENST00000526806 358 ntBASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 AL353732.1-201ENST00000569618 1459 ntBASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB1Q9H4B7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 KRT18P27-201ENST00000427733 1299 ntBASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 AC091304.2-201ENST00000564639 760 ntBASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TUBB1Q9H4B7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms