Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 FLJ16779-201ENST00000612722 7638 ntBASIC16.84■□□□□ 0.29
VPS11Q9H270 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
VPS11Q9H270 AP002414.1-201ENST00000391405 1147 ntBASIC16.84■□□□□ 0.29
VPS11Q9H270 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 AC099336.1-202ENST00000602961 463 ntBASIC16.84■□□□□ 0.29
VPS11Q9H270 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.84■□□□□ 0.29
VPS11Q9H270 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS11Q9H270 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
VPS11Q9H270 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.84■□□□□ 0.29
VPS11Q9H270 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.83■□□□□ 0.29
VPS11Q9H270 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.83■□□□□ 0.29
VPS11Q9H270 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VPS11Q9H270 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.29
VPS11Q9H270 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS11Q9H270 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS11Q9H270 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
VPS11Q9H270 AL596087.1-201ENST00000400979 1969 ntBASIC16.83■□□□□ 0.28
VPS11Q9H270 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.83■□□□□ 0.28
VPS11Q9H270 ABCD1P5-201ENST00000445663 754 ntBASIC16.83■□□□□ 0.28
VPS11Q9H270 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.83■□□□□ 0.28
VPS11Q9H270 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VPS11Q9H270 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.83■□□□□ 0.28
VPS11Q9H270 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.83■□□□□ 0.28
VPS11Q9H270 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.83■□□□□ 0.28
VPS11Q9H270 SIGLEC16-201ENST00000599858 1437 ntBASIC16.83■□□□□ 0.28
VPS11Q9H270 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VPS11Q9H270 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS11Q9H270 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VPS11Q9H270 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.83■□□□□ 0.28
VPS11Q9H270 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VPS11Q9H270 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VPS11Q9H270 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VPS11Q9H270 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VPS11Q9H270 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 AL356309.3-201ENST00000624132 1934 ntBASIC16.82■□□□□ 0.28
VPS11Q9H270 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VPS11Q9H270 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.82■□□□□ 0.28
VPS11Q9H270 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS11Q9H270 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VPS11Q9H270 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms