Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 AC132008.2-207ENST00000454517 770 ntBASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 MTHFR-217ENST00000641820 1569 ntBASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
POLR2J3Q9H1A7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 AL356309.3-201ENST00000624132 1934 ntBASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PAWRP1-201ENST00000451083 565 ntBASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 AF228730.7-201ENST00000641842 219 ntBASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
POLR2J3Q9H1A7 HYMAI-201ENST00000635591 3347 ntBASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 BX005266.1-201ENST00000473402 457 ntBASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 AC138894.3-201ENST00000603787 634 ntBASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.46■□□□□ 0.07
POLR2J3Q9H1A7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms