Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 HLA-J-202ENST00000469281 1241 ntBASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 FOSL1P1-201ENST00000511041 816 ntBASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 AL603832.2-201ENST00000566195 2125 ntBASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
AMBRA1Q9C0C7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AC004870.1-201ENST00000315132 882 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 LINC00982-205ENST00000420957 435 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 KRT16P4-201ENST00000453883 522 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 KRT18P31-201ENST00000506277 1292 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AC010491.1-201ENST00000563101 2797 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AL596087.1-201ENST00000400979 1969 ntBASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
AMBRA1Q9C0C7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
AMBRA1Q9C0C7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms