Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 BOLA2P3-201ENST00000404566 256 ntBASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 RARRES2P5-201ENST00000564013 466 ntBASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 AL033527.5-201ENST00000641382 801 ntBASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNTNAP4Q9C0A0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CNTNAP4Q9C0A0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AL031731.1-201ENST00000642131 2094 ntBASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 USP32P1-208ENST00000506594 1164 ntBASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 MIR4525-201ENST00000580000 75 ntBASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNTNAP4Q9C0A0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 REXO1L6P-201ENST00000603433 1515 ntBASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 CDC14C-201ENST00000428251 1719 ntBASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 GGT4P-201ENST00000623672 1708 ntBASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 CROCCP4-201ENST00000457096 498 ntBASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 AL391069.4-201ENST00000609583 481 ntBASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNTNAP4Q9C0A0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 FO393414.2-201ENST00000405153 598 ntBASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNTNAP4Q9C0A0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms