Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 AC026150.2-201ENST00000564693 1156 ntBASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 AGGF1P2-201ENST00000426656 2106 ntBASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 AD000864.1-201ENST00000624076 2295 ntBASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM47Q9BQJ4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 SPDYE14P-201ENST00000442619 822 ntBASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 AC020765.3-201ENST00000613051 740 ntBASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 AP001059.3-201ENST00000619053 235 ntBASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM47Q9BQJ4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC092171.3-201ENST00000610122 2651 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 ALG1L8P-201ENST00000533887 760 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AL512356.2-201ENST00000546955 174 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC025678.2-201ENST00000562061 970 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC011676.5-201ENST00000624864 2660 ntBASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM47Q9BQJ4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM47Q9BQJ4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms