Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 AC131009.4-201ENST00000624048 1740 ntBASIC18.78■□□□□ 0.6
MTRQ99707 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 RPSAP43-201ENST00000402237 625 ntBASIC18.78■□□□□ 0.6
MTRQ99707 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.78■□□□□ 0.6
MTRQ99707 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.78■□□□□ 0.6
MTRQ99707 AC005412.3-201ENST00000580309 715 ntBASIC18.78■□□□□ 0.6
MTRQ99707 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.78■□□□□ 0.6
MTRQ99707 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.78■□□□□ 0.6
MTRQ99707 AC006538.3-201ENST00000612495 578 ntBASIC18.78■□□□□ 0.6
MTRQ99707 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.78■□□□□ 0.6
MTRQ99707 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.78■□□□□ 0.6
MTRQ99707 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MTRQ99707 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MTRQ99707 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MTRQ99707 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.77■□□□□ 0.6
MTRQ99707 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MTRQ99707 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
MTRQ99707 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.77■□□□□ 0.6
MTRQ99707 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.77■□□□□ 0.6
MTRQ99707 AC074386.1-202ENST00000463561 864 ntBASIC18.77■□□□□ 0.6
MTRQ99707 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.77■□□□□ 0.6
MTRQ99707 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.77■□□□□ 0.6
MTRQ99707 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.77■□□□□ 0.6
MTRQ99707 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.77■□□□□ 0.6
MTRQ99707 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MTRQ99707 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
MTRQ99707 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
MTRQ99707 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MTRQ99707 GGT4P-201ENST00000623672 1708 ntBASIC18.77■□□□□ 0.59
MTRQ99707 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MTRQ99707 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MTRQ99707 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.76■□□□□ 0.59
MTRQ99707 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.76■□□□□ 0.59
MTRQ99707 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.76■□□□□ 0.59
MTRQ99707 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.76■□□□□ 0.59
MTRQ99707 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.76■□□□□ 0.59
MTRQ99707 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
MTRQ99707 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
MTRQ99707 AC112482.1-201ENST00000492080 688 ntBASIC18.76■□□□□ 0.59
MTRQ99707 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 GPALPP1-207ENST00000611650 899 ntBASIC18.76■□□□□ 0.59
MTRQ99707 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 AL031731.1-201ENST00000642131 2094 ntBASIC18.76■□□□□ 0.59
MTRQ99707 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MTRQ99707 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MTRQ99707 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms