Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.99□□□□□ -0.17
CCL13Q99616 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCL13Q99616 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.99□□□□□ -0.17
CCL13Q99616 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CCL13Q99616 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL13Q99616 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.98□□□□□ -0.17
CCL13Q99616 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.98□□□□□ -0.17
CCL13Q99616 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.98□□□□□ -0.17
CCL13Q99616 AC002347.1-201ENST00000569543 541 ntBASIC13.98□□□□□ -0.17
CCL13Q99616 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL13Q99616 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL13Q99616 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.98□□□□□ -0.17
CCL13Q99616 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.98□□□□□ -0.17
CCL13Q99616 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.98□□□□□ -0.17
CCL13Q99616 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCL13Q99616 AC092171.3-201ENST00000610122 2651 ntBASIC13.98□□□□□ -0.17
CCL13Q99616 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.97□□□□□ -0.17
CCL13Q99616 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CCL13Q99616 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.97□□□□□ -0.17
CCL13Q99616 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CCL13Q99616 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.97□□□□□ -0.17
CCL13Q99616 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.97□□□□□ -0.17
CCL13Q99616 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.97□□□□□ -0.17
CCL13Q99616 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms