Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 AC006449.6-201ENST00000612330 2296 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 AL356309.3-201ENST00000624132 1934 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 POU5F1P6-201ENST00000466990 990 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.04□□□□□ -0.32
TRGV9Q99603 AC139887.3-201ENST00000568585 713 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.04□□□□□ -0.32
TRGV9Q99603 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.04□□□□□ -0.32
TRGV9Q99603 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.04□□□□□ -0.32
TRGV9Q99603 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRGV9Q99603 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.04□□□□□ -0.32
TRGV9Q99603 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRGV9Q99603 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRGV9Q99603 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRGV9Q99603 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 LINC01144-201ENST00000626198 1710 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.03□□□□□ -0.32
TRGV9Q99603 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV9Q99603 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV9Q99603 AC087163.2-201ENST00000457299 853 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRGV9Q99603 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV9Q99603 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.03□□□□□ -0.32
TRGV9Q99603 AC138894.3-201ENST00000603787 634 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 AC092119.3-201ENST00000612618 583 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 REXO1L3P-201ENST00000622202 1288 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 AC105917.1-201ENST00000506637 2539 ntBASIC13.03□□□□□ -0.32
TRGV9Q99603 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.03□□□□□ -0.32
TRGV9Q99603 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV9Q99603 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV9Q99603 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms