Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PKP4Q99569 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PKP4Q99569 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.24■□□□□ 0.19
PKP4Q99569 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PKP4Q99569 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.24■□□□□ 0.19
PKP4Q99569 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.24■□□□□ 0.19
PKP4Q99569 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.24■□□□□ 0.19
PKP4Q99569 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.24■□□□□ 0.19
PKP4Q99569 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.24■□□□□ 0.19
PKP4Q99569 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.24■□□□□ 0.19
PKP4Q99569 AL513190.1-201ENST00000621254 727 ntBASIC16.24■□□□□ 0.19
PKP4Q99569 AC092865.6-201ENST00000642101 219 ntBASIC16.24■□□□□ 0.19
PKP4Q99569 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.24■□□□□ 0.19
PKP4Q99569 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
PKP4Q99569 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.24■□□□□ 0.19
PKP4Q99569 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PKP4Q99569 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 AL031731.1-201ENST00000642131 2094 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PKP4Q99569 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PKP4Q99569 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 AL118508.1-201ENST00000613502 2345 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PKP4Q99569 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PKP4Q99569 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 RNU1-129P-201ENST00000384064 167 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 POLD2P1-201ENST00000511220 997 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 KRT18P58-201ENST00000527480 1120 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 U1.21-201ENST00000580816 167 ntBASIC16.23■□□□□ 0.19
PKP4Q99569 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.23■□□□□ 0.19
PKP4Q99569 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PKP4Q99569 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PKP4Q99569 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.22■□□□□ 0.19
PKP4Q99569 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PKP4Q99569 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PKP4Q99569 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
PKP4Q99569 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.22■□□□□ 0.19
PKP4Q99569 ALOX12P2-203ENST00000570921 1945 ntBASIC16.22■□□□□ 0.19
PKP4Q99569 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.22■□□□□ 0.19
PKP4Q99569 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PKP4Q99569 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.22■□□□□ 0.19
PKP4Q99569 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.22■□□□□ 0.19
PKP4Q99569 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
PKP4Q99569 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
PKP4Q99569 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PKP4Q99569 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PKP4Q99569 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.22■□□□□ 0.19
PKP4Q99569 AL671883.3-201ENST00000603274 991 ntBASIC16.22■□□□□ 0.19
PKP4Q99569 AL031055.1-201ENST00000606362 631 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms