Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SPENQ96T58 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.81□□□□□ -0.04
SPENQ96T58 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.81□□□□□ -0.04
SPENQ96T58 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.81□□□□□ -0.04
SPENQ96T58 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 AL136982.4-201ENST00000437689 1740 ntBASIC14.81□□□□□ -0.04
SPENQ96T58 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 AC093004.1-201ENST00000508850 424 ntBASIC14.81□□□□□ -0.04
SPENQ96T58 AC055876.2-201ENST00000531834 546 ntBASIC14.81□□□□□ -0.04
SPENQ96T58 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.81□□□□□ -0.04
SPENQ96T58 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.81□□□□□ -0.04
SPENQ96T58 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.81□□□□□ -0.04
SPENQ96T58 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.81□□□□□ -0.04
SPENQ96T58 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.81□□□□□ -0.04
SPENQ96T58 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPENQ96T58 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPENQ96T58 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SPENQ96T58 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SPENQ96T58 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.8□□□□□ -0.04
SPENQ96T58 AC003101.2-201ENST00000612557 442 ntBASIC14.8□□□□□ -0.04
SPENQ96T58 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.8□□□□□ -0.04
SPENQ96T58 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 AC234783.1-201ENST00000441761 496 ntBASIC14.8□□□□□ -0.04
SPENQ96T58 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.8□□□□□ -0.04
SPENQ96T58 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
SPENQ96T58 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.8□□□□□ -0.04
SPENQ96T58 AC244093.1-201ENST00000610837 814 ntBASIC14.8□□□□□ -0.04
SPENQ96T58 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 SRD5A3P1-201ENST00000603021 949 ntBASIC14.8□□□□□ -0.04
SPENQ96T58 AC007431.3-201ENST00000623221 587 ntBASIC14.8□□□□□ -0.04
SPENQ96T58 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.8□□□□□ -0.04
SPENQ96T58 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SPENQ96T58 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.8□□□□□ -0.04
SPENQ96T58 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.8□□□□□ -0.04
SPENQ96T58 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.79□□□□□ -0.04
SPENQ96T58 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPENQ96T58 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPENQ96T58 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 AL353705.2-201ENST00000428243 662 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms