Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 AL022342.1-201ENST00000400363 863 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 POU5F1P6-201ENST00000466990 990 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 AC068137.2-201ENST00000605408 478 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 AC092865.6-201ENST00000642101 219 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 AC006449.5-201ENST00000610658 2098 ntBASIC14.67□□□□□ -0.06
TMEM54Q969K7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 MIR574-201ENST00000385209 96 ntBASIC14.66□□□□□ -0.06
TMEM54Q969K7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 KRT18P58-201ENST00000527480 1120 ntBASIC14.66□□□□□ -0.06
TMEM54Q969K7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 AC005052.1-201ENST00000625181 2492 ntBASIC14.66□□□□□ -0.06
TMEM54Q969K7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM54Q969K7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.66□□□□□ -0.06
TMEM54Q969K7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM54Q969K7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM54Q969K7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms