Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 SNX33P1-201ENST00000592116 1762 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 MIR943-201ENST00000401286 94 ntBASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AC055876.3-201ENST00000431496 288 ntBASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AC138649.4-201ENST00000612222 287 ntBASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 AJ011932.1-201ENST00000621707 465 ntBASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP6V0A1Q93050 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 AC125807.1-201ENST00000483097 614 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 INGX-202ENST00000489074 768 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 AC084121.4-201ENST00000641598 221 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 AF228730.8-201ENST00000642140 221 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 AC105020.1-201ENST00000435356 2205 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 AC005915.1-201ENST00000624912 2018 ntBASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP6V0A1Q93050 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 AC008677.1-201ENST00000519230 1561 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 AC107890.1-201ENST00000422478 521 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 BASP1P1-201ENST00000430708 665 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 SPDYE14P-201ENST00000442619 822 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 COX20P2-201ENST00000452636 358 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 KRT18P34-201ENST00000488218 1270 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 SLC25A39P2-201ENST00000537614 270 ntBASIC18.6■□□□□ 0.57
ATP6V0A1Q93050 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms