Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ATG4AQ8WYN0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 AC025062.2-201ENST00000605477 670 ntBASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATG4AQ8WYN0 SLC22A20-204ENST00000530038 1673 ntBASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 AKR1C7P-201ENST00000305623 895 ntBASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 PMS2P1-201ENST00000431037 1228 ntBASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
ATG4AQ8WYN0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 AC010491.1-201ENST00000563101 2797 ntBASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 AC131009.4-201ENST00000624048 1740 ntBASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 TSPY19P-201ENST00000418461 509 ntBASIC17.31■□□□□ 0.36
ATG4AQ8WYN0 TSPY18P-201ENST00000441642 509 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms